PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00107.1.g01190.1.sm.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 237aa    MW: 25217.7 Da    PI: 7.6076
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00107.1.g01190.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like39.99.2e-133862125
                       G2-like  1 kprlrWtpeLHerFveaveqLGGse 25
                                  kprlrWt +LHerFv+av+qLGG+e
  Zjn_sc00107.1.g01190.1.sm.mk 38 KPRLRWTADLHERFVDAVAQLGGPE 62
                                  79*********************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.0E-113564IPR009057Homeodomain-like
TIGRFAMsTIGR015571.5E-73863IPR006447Myb domain, plants
PfamPF143795.1E-20110155IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MFPPGLIHHR PDGPAPGDAP LRSGPGGGPS LVLTADPKPR LRWTADLHER FVDAVAQLGG  60
PESERLPSHP SNARSLAGAS IGLLVGLPRV DSCPARPIVA SLLLERGSQE VKEALRAQME  120
VQRRLHEQVE VQKRVQIRMD ALQKYIDGIL ENACKLVTEQ FASSGFSISD PADLPDLSPG  180
GGGVMCGPND TMRSSVFNQL AVSSMDSHSP GGKPSPSGIE GPPLLLQKSP ELRRRSS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004956514.11e-105PREDICTED: myb family transcription factor APL-like isoform X1
SwissprotQ9SAK51e-25APL_ARATH; Myb family transcription factor APL
TrEMBLK3ZV101e-104K3ZV10_SETIT; Uncharacterized protein
STRINGSi030441m1e-104(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP34273873
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13640.15e-34G2-like family protein